sbmlutils.cytoscape

Module for interacting with Cytoscape.

Module Contents

Functions

visualize_antimony(source[, delete_session])

Visualize antimony in cytoscape.

visualize_sbml(sbml_path[, delete_session])

Visualize SBML networks in cytoscape.

Attributes

logger

sbmlutils.cytoscape.logger[source]
sbmlutils.cytoscape.visualize_antimony(source, delete_session=False)[source]

Visualize antimony in cytoscape.

Parameters:

  • source (Union[pathlib.Path, str]) –

  • delete_session (bool) –

Return type:

Any

sbmlutils.cytoscape.visualize_sbml(sbml_path, delete_session=False)[source]

Visualize SBML networks in cytoscape.

Parameters:

  • sbml_path (pathlib.Path) –

  • delete_session (bool) –

Return type:

Any